| ID | mmu_circ_0001028 | |||||
| Alias | C2C12_circ_006386, mm9_circ_017329 | |||||
| Position | chr2:68228970-68248198 | |||||
| Strand | - | |||||
| Genomic length | 19228 | |||||
| Spliced sequence length | 420 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016866 | |||||
| Gene symbol | Stk39 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 14 | 13 | 2 | 11 | forebrain | 32 | 15 | 32 | 85 | PN_D01 | 7 | 5 | 4 | 5 | hindbrain | 50 | 15 | 29 | 29 | sy_cell | 5 | 5 | 3 | 11 | P19_exp1_D0 | 3 | 2 | 15 | 26 | P19_exp1_D12 | 7 | 6 | 10 | 10 | olfactory_bulb | 14 | 11 | 4 | 12 | P19_exp2_D4 | 4 | 4 | 4 | 17 | frontal_cortex | 10 | 7 | 4 | 17 | PN_D07 | 10 | 8 | 0 | 14 | P19_exp1_D4 | 2 | 2 | 6 | 9 | hippocampus | 18 | 12 | 13 | 16 | PN_D14 | 14 | 11 | 6 | 12 | P19_exp2_D12 | 5 | 5 | 7 | 12 | sy_cyto | 8 | 8 | 4 | 11 | sy_snpt | 6 | 5 | 2 | 8 | midbrain | 37 | 13 | 32 | 30 | PN_D21 | 18 | 13 | 6 | 15 | PN_D28 | 9 | 8 | 0 | 12 |
| Memczak2013 | mm_head | 14 | 10 | 1 | 9 | mm_brain1 | 2 | 2 | 1 | 1 | mm_brain2 | 1 | 1 | 1 | 0 |