| ID | mmu_circ_0000215 | |||||
| Alias | C2C12_circ_008360, mm9_circ_008959 | |||||
| Position | chr10:116792990-116805044 | |||||
| Strand | - | |||||
| Genomic length | 12054 | |||||
| Spliced sequence length | 1599 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001013391 | |||||
| Gene symbol | Cpsf6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 10 | 7 | 17 | 21 | PN_D14 | 17 | 15 | 14 | 23 | hippocampus | 9 | 8 | 20 | 28 | PN_D07 | 6 | 6 | 13 | 24 | forebrain | 62 | 29 | 101 | 186 | P19_exp2_D4 | 11 | 7 | 62 | 57 | hindbrain | 58 | 7 | 67 | 54 | olfactory_bulb | 3 | 3 | 22 | 20 | midbrain | 49 | 14 | 106 | 68 | P19_exp1_D12 | 53 | 27 | 28 | 28 | PN_D28 | 7 | 5 | 12 | 11 | sy_snpt | 7 | 5 | 2 | 6 | frontal_cortex | 11 | 10 | 22 | 21 | P19_exp1_D0 | 4 | 4 | 26 | 50 | P19_exp1_D2 | 6 | 5 | 28 | 41 | P19_exp2_D0 | 3 | 2 | 46 | 42 | P19_exp2_D12 | 7 | 7 | 33 | 30 | P19_exp1_D4 | 15 | 13 | 46 | 41 | PN_D21 | 15 | 10 | 8 | 21 | sy_cyto | 6 | 5 | 7 | 12 | PN_D01 | 2 | 2 | 22 | 23 |
| Memczak2013 | mm_ES | 2 | 2 | 22 | 20 | mm_head | 2 | 1 | 15 | 19 | mm_brain2 | 1 | 1 | 2 | 2 | mm_brain1 | 22 | 14 | 16 | 10 |