| ID | hsa_circ_0008887 | |||||
| Position | chr11:33307958-33350179 | |||||
| Strand | + | |||||
| Genomic length | 42221 | |||||
| Spliced sequence length | 1223 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005734 | |||||
| Gene symbol | HIPK3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | occipital_lobe | 21 | 13 | 84 | 85 | frontal_cortex | 17 | 11 | 101 | 102 | temporal_lobe | 5 | 2 | 53 | 66 | diencephalon | 9 | 8 | 98 | 105 | parietal_lobe | 6 | 4 | 98 | 83 |
| Jeck2013 | Hs68_RNase | 24 | 21 | 1 | 2 | Hs68_control | 1 | 1 | 23 | 32 |
| Salzman2013 | Huvec | 2 | 1 | 29 | 38 | Bj | 6 | 4 | 39 | 44 | Mcf7 | Sknshra | 6 | 3 | 28 | 65 | Gm12878 | A549 | 2 | 1 | 44 | 70 | K562 | 4 | 4 | 15 | 62 | Hepg2 | Nhek | Helas3 | 3 | 2 | 40 | 59 | Ag04450 | 1 | 1 | 42 | 58 |