| ID | hsa_circ_0008494 | |||||
| Position | chr1:27056141-27059283 | |||||
| Strand | + | |||||
| Genomic length | 3142 | |||||
| Spliced sequence length | 783 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006015 | |||||
| Gene symbol | ARID1A | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 26 | 16 | 29 | 2 | SY5Y_exp2_D8 | 2 | 2 | 0 | 18 | parietal_lobe | 30 | 24 | 45 | 21 | Sy5y_exp1_D2 | 5 | 3 | 17 | 28 | cerebellum | 22 | 21 | 23 | 23 | occipital_lobe | 14 | 11 | 20 | 3 | temporal_lobe | 24 | 12 | 31 | 3 | diencephalon | 24 | 22 | 21 | 8 | SY5Y_exp2_D0 | 5 | 5 | 15 | 22 | Sy5y_exp1_D4 | 3 | 3 | 13 | 26 |
| Salzman2013 | Nhek | 2 | 1 | 1 | 43 | Helas3 | 15 | 7 | 6 | 33 | Sknshra | 34 | 14 | 6 | 34 | Ag04450 | 12 | 7 | 0 | 15 | Huvec | 2 | 2 | 1 | 43 | H1hesc | 15 | 8 | 8 | 86 | Gm12878 | 5 | 3 | 0 | 48 | Bj | 8 | 2 | 8 | 7 | Hsmm | 14 | 2 | 3 | 32 | A549 | 14 | 8 | 6 | 17 | Nhlf | 44 | 2 | 0 | 13 | K562 | 6 | 4 | 0 | 44 |
| Jeck2013 | Hs68_RNase | 59 | 45 | 2 | 2 | Hs68_control | 10 | 6 | 2 | 17 |
| Maass2017 | vena_cava | 2 | 2 | 0 | 5 | right_atrium | 3 | 3 | 3 | 5 |