| ID | hsa_circ_0008275 | |||||
| Position | chr1:12359258-12368698 | |||||
| Strand | + | |||||
| Genomic length | 9440 | |||||
| Spliced sequence length | 617 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015378 | |||||
| Gene symbol | VPS13D | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 7 | 6 | 47 | 52 | temporal_lobe | 14 | 7 | 27 | 25 | parietal_lobe | 12 | 12 | 70 | 64 | occipital_lobe | 36 | 26 | 45 | 38 | frontal_cortex | 49 | 27 | 52 | 35 | diencephalon | 25 | 17 | 64 | 51 |
| Salzman2013 | Gm12878 | H1hesc | Hepg2 | 1 | 1 | 61 | 10 | Sknshra | 3 | 1 | 42 | 29 | Ag04450 | 3 | 2 | 45 | 20 | Nhek | Bj | K562 | 13 | 11 | 89 | 96 | A549 | 4 | 2 | 32 | 15 |
| Jeck2013 | Hs68_control | 2 | 2 | 11 | 20 | Hs68_RNase | 69 | 48 | 9 | 18 |