| ID | hsa_circ_0007292 | |||||
| Position | chr10:7839009-7844817 | |||||
| Strand | + | |||||
| Genomic length | 5808 | |||||
| Spliced sequence length | 799 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001001973 | |||||
| Gene symbol | ATP5C1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 14 | 14 | 54 | 150 | Hs68_RNase | 137 | 70 | 14 | 0 |
| Salzman2013 | Hepg2 | 31 | 12 | 5 | 11 | K562 | 65 | 44 | 9 | 75 | H1hesc | 41 | 12 | 2 | 0 | Helas3 | 16 | 10 | 4 | 27 | Nhek | Huvec | Nhlf | Gm12878 | 29 | 20 | 2 | 31 | Bj | 12 | 8 | 16 | 2 | Mcf7 | A549 | 10 | 8 | 6 | 7 | Ag04450 | Sknshra | 37 | 16 | 10 | 4 |
| Rybak2015 | temporal_lobe | 603 | 154 | 29 | 17 | parietal_lobe | 252 | 126 | 34 | 27 | diencephalon | 166 | 103 | 32 | 46 | SY5Y_exp2_D0 | 4 | 4 | 18 | 3 | Sy5y_exp1_D2 | 9 | 8 | 23 | 20 | cerebellum | 148 | 105 | 42 | 43 | frontal_cortex | 592 | 166 | 48 | 53 | Sy5y_exp1_D4 | 6 | 6 | 28 | 12 | Sy5y_exp1_D0 | 9 | 8 | 26 | 25 | SY5Y_exp2_D8 | 2 | 2 | 12 | 0 | occipital_lobe | 418 | 155 | 29 | 40 |
| Maass2017 | platelets | 7 | 7 | 2 | 0 | MSC_047 | 2 | 2 | 7 | 15 | adipose | 4 | 3 | 9 | 7 | vena_cava | 4 | 4 | 17 | 40 | LCL | 4 | 3 | 9 | 0 | WAS2 | 18 | 16 | 16 | 3 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||