| ID | hsa_circ_0006127 | |||||
| Position | chr16:30740286-30740893 | |||||
| Strand | + | |||||
| Genomic length | 607 | |||||
| Spliced sequence length | 469 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006662 | |||||
| Gene symbol | SRCAP | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hmec | 30 | 3 | 4 | 0 | H1hesc | 13 | 10 | 6 | 26 | Bj | 35 | 23 | 3 | 17 | Nhlf | 21 | 5 | 46 | 29 | Hepg2 | 24 | 15 | 11 | 26 | Gm12878 | 19 | 13 | 3 | 10 | Hsmm | 89 | 30 | 37 | 23 | Nhek | 36 | 20 | 22 | 32 | K562 | 10 | 10 | 3 | 9 | Mcf7 | 103 | 29 | 26 | 23 | Huvec | 23 | 12 | 12 | 14 | Ag04450 | 29 | 18 | 5 | 12 | A549 | 33 | 26 | 7 | 24 | Sknshra | 42 | 32 | 2 | 21 | Helas3 | 42 | 29 | 4 | 34 |
| Maass2017 | vena_cava | 2 | 2 | 0 | 0 | |
| Rybak2015 | frontal_cortex | 91 | 52 | 0 | 5 | diencephalon | 23 | 23 | 0 | 12 | occipital_lobe | 56 | 37 | 0 | 5 | cerebellum | 16 | 16 | 4 | 14 | Sy5y_exp1_D4 | 2 | 2 | 2 | 12 | temporal_lobe | 29 | 14 | 4 | 9 | Sy5y_exp1_D0 | 5 | 4 | 9 | 16 | Sy5y_exp1_D2 | 6 | 6 | 5 | 15 | parietal_lobe | 37 | 31 | 2 | 18 |
| Jeck2013 | Hs68_control | 15 | 13 | 17 | 15 | Hs68_RNase | 467 | 172 | 7 | 25 |