| ID | hsa_circ_0005986 | |||||
| Position | chr1:14057494-14068652 | |||||
| Strand | + | |||||
| Genomic length | 11158 | |||||
| Spliced sequence length | 375 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_012231 | |||||
| Gene symbol | PRDM2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | LCL | 2 | 2 | 4 | 5 | |
| Jeck2013 | Hs68_RNase | 32 | 28 | 31 | 27 | Hs68_control | 4 | 4 | 9 | 5 |
| Rybak2015 | temporal_lobe | 36 | 24 | 43 | 47 | Sy5y_exp1_D2 | 2 | 2 | 2 | 0 | cerebellum | 20 | 18 | 43 | 44 | occipital_lobe | 70 | 42 | 73 | 73 | frontal_cortex | 80 | 46 | 82 | 72 | parietal_lobe | 30 | 23 | 51 | 58 | diencephalon | 21 | 20 | 47 | 57 |
| Salzman2013 | K562 | 1 | 1 | 1 | 0 | Bj | 4 | 3 | 6 | 2 | A549 | 4 | 3 | 2 | 0 | Ag04450 | 4 | 4 | 3 | 2 | Gm12878 | 3 | 3 | 25 | 4 | Sknshra | 5 | 3 | 4 | 3 |