| ID | hsa_circ_0004494 | |||||
| Position | chr13:33306237-33309467 | |||||
| Strand | + | |||||
| Genomic length | 3230 | |||||
| Spliced sequence length | 283 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015032 | |||||
| Gene symbol | PDS5B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D2 | 2 | 2 | 27 | 17 | frontal_cortex | 174 | 72 | 135 | 96 | occipital_lobe | 227 | 77 | 163 | 125 | parietal_lobe | 57 | 42 | 161 | 102 | Sy5y_exp1_D0 | 6 | 4 | 34 | 16 | diencephalon | 47 | 36 | 194 | 91 | temporal_lobe | 100 | 41 | 136 | 70 | cerebellum | 63 | 41 | 138 | 84 |
| Salzman2013 | A549 | 24 | 14 | 11 | 6 | K562 | 35 | 23 | 91 | 69 | H1hesc | 18 | 11 | 99 | 35 | Ag04450 | 14 | 13 | 27 | 27 | Hepg2 | 45 | 21 | 9 | 4 | Helas3 | 54 | 28 | 4 | 14 | Sknshra | 3 | 2 | 23 | 19 | Bj | 14 | 6 | 17 | 6 | Huvec | 4 | 2 | 12 | 11 | Gm12878 | 122 | 55 | 105 | 38 | Nhek | 28 | 7 | 21 | 19 | Hsmm | Mcf7 | 16 | 3 | 16 | 7 |
| Maass2017 | neutophils | 3 | 3 | 6 | 3 | adipose | 2 | 2 | 12 | 2 | platelets | 5 | 5 | 5 | 0 |
| Jeck2013 | Hs68_control | 8 | 7 | 18 | 16 | Hs68_RNase | 99 | 58 | 4 | 12 |