| ID | hsa_circ_0003789 | |||||
| Position | chr2:122514815-122520660 | |||||
| Strand | + | |||||
| Genomic length | 5845 | |||||
| Spliced sequence length | 387 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_004622 | |||||
| Gene symbol | TSN | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 29 | 26 | 0 | 0 | Hs68_control |
| Rybak2015 | temporal_lobe | 27 | 17 | 11 | 77 | cerebellum | 7 | 6 | 4 | 152 | occipital_lobe | 21 | 12 | 7 | 130 | frontal_cortex | 51 | 26 | 6 | 147 | parietal_lobe | 9 | 8 | 3 | 110 | diencephalon | 18 | 15 | 10 | 177 |
| Salzman2013 | K562 | 2 | 2 | 0 | 216 | Mcf7 | 7 | 1 | 0 | 71 | Gm12878 | 5 | 3 | 0 | 88 | H1hesc | 5 | 2 | 2 | 179 |