| ID | hsa_circ_0001819 | |||||
| Alias | hsa_circ_000479 | |||||
| Position | chr8:103372298-103373854 | |||||
| Strand | - | |||||
| Genomic length | 1556 | |||||
| Spliced sequence length | 324 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015902 | |||||
| Gene symbol | UBR5 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Gm12878 | 13 | 9 | 42 | 115 | Sknshra | 11 | 6 | 21 | 68 | H1hesc | 2 | 1 | 38 | 158 | Nhek | 7 | 3 | 21 | 56 | Hepg2 | Huvec | Bj | 3 | 1 | 27 | 37 | Helas3 | K562 | 25 | 21 | 46 | 147 | A549 | 16 | 9 | 11 | 64 | Ag04450 | 13 | 10 | 29 | 85 |
| Jeck2013 | Hs68_RNase | 103 | 51 | 1 | 40 | Hs68_control | 6 | 4 | 13 | 27 |
| Memczak2013 | neutr | cd_19 | 16 | 7 | 3 | 0 |
| Maass2017 | adipose | 7 | 5 | 3 | 5 | platelets | 9 | 6 | 0 | 0 | vena_cava | 3 | 3 | 0 | 2 | chondrocytes | 3 | 2 | 0 | 0 |
| Rybak2015 | cerebellum | 45 | 33 | 31 | 83 | diencephalon | 59 | 40 | 29 | 73 | parietal_lobe | 50 | 29 | 40 | 87 | frontal_cortex | 212 | 65 | 29 | 96 | occipital_lobe | 129 | 53 | 25 | 109 | Sy5y_exp1_D2 | 3 | 3 | 2 | 19 | Sy5y_exp1_D4 | 2 | 2 | 2 | 16 | temporal_lobe | 59 | 22 | 14 | 62 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||