circBase

ID	hsa_circ_0001727
Alias	hsa_circ_000017
Position	chr7:99621041-99621930
Strand	+
Genomic length	889
Spliced sequence length	668
Annotation	ANNOTATED CDS coding INTERNAL OVCODE OVEXON UTR5
Repeats	None
Best transcript	NM_003439
Gene symbol	ZKSCAN1
Experimental exidence	Memczak2013
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Memczak2013	cd_34	11	4	0	6
		cd_19	19	9	1	0
		HEK293	2	2	1	10
	Maass2017	HUAEC	2	2	11	4
		platelets	5	4	0	0
		LCL	5	4	4	4
		adipose	4	4	7	6
		WAS2	7	6	10	17
		EPC	4	4	8	5
	Jeck2013	Hs68_RNase	1247	257	7	12
	Jeck2013	Hs68_control	61	40	38	36
	Salzman2013	K562	198	127	13	142
		Bj	114	50	27	98
		Ag04450	134	69	32	128
		Helas3	112	60	19	157
		Sknshra	198	78	54	334
		Hsmm	15	3	3	69
		A549	148	75	26	112
		Huvec	39	18	8	121
		Mcf7	47	13	5	155
		Hepg2	119	54	13	177
		Gm12878	155	78	7	92
		Nhlf	3	2	0	43
		H1hesc	150	80	8	144
		Nhek	243	84	22	160
	Rybak2015	SY5Y_exp2_D0	24	19	34	40
		Sy5y_exp1_D0	37	25	35	40
		diencephalon	425	219	39	107
		Sy5y_exp1_D2	22	15	47	43
		temporal_lobe	911	214	28	94
		occipital_lobe	1427	352	34	112
		cerebellum	260	165	44	109
		SY5Y_exp2_D4	9	9	33	30
		SY5Y_exp2_D8	7	7	30	35
		Sy5y_exp1_D4	18	14	41	38
		frontal_cortex	2029	345	44	124
		parietal_lobe	570	213	54	105
Aligned reads	Memczak 2013 circRNA study (pooled samples)