| ID | hsa_circ_0001667 | |||||
| Alias | hsa_circ_001717 | |||||
| Position | chr7:810107-814799 | |||||
| Strand | + | |||||
| Genomic length | 4692 | |||||
| Spliced sequence length | 456 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_017802 | |||||
| Gene symbol | HEATR2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Gm12878 | 8 | 7 | 32 | 21 | Huvec | 3 | 2 | 59 | 25 | Ag04450 | 12 | 9 | 22 | 27 | Sknshra | 6 | 5 | 20 | 40 | Nhek | 6 | 4 | 54 | 34 | H1hesc | 2 | 1 | 142 | 105 | Helas3 | 15 | 12 | 85 | 27 | Hepg2 | 19 | 9 | 63 | 31 | K562 | 1 | 1 | 47 | 75 | Bj | 21 | 7 | 11 | 11 | Mcf7 | 18 | 7 | 23 | 36 | A549 | 21 | 14 | 22 | 39 |
| Rybak2015 | cerebellum | 11 | 11 | 13 | 17 | parietal_lobe | 19 | 12 | 15 | 12 | occipital_lobe | 15 | 7 | 9 | 8 | Sy5y_exp1_D0 | 4 | 4 | 29 | 35 | temporal_lobe | 22 | 10 | 2 | 5 | diencephalon | 15 | 11 | 7 | 10 | frontal_cortex | 48 | 20 | 9 | 0 |
| Memczak2013 | cd_19 | 11 | 4 | 0 | 3 | |
| Jeck2013 | Hs68_RNase | 68 | 49 | 15 | 12 | Hs68_control |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||