| ID | hsa_circ_0001564 | |||||
| Alias | hsa_circ_001742 | |||||
| Position | chr5:179132679-179137066 | |||||
| Strand | + | |||||
| Genomic length | 4387 | |||||
| Spliced sequence length | 724 | |||||
| Annotation |
| |||||
| Repeats | LINE | |||||
| Best transcript | NM_001024649 | |||||
| Gene symbol | CANX | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 123 | 61 | 725 | 238 | parietal_lobe | 20 | 14 | 370 | 182 | cerebellum | 28 | 18 | 595 | 281 | occipital_lobe | 65 | 33 | 583 | 226 | diencephalon | 21 | 18 | 562 | 289 | temporal_lobe | 51 | 24 | 369 | 238 |
| Salzman2013 | H1hesc | 8 | 3 | 703 | 135 | K562 | 68 | 38 | 1672 | 382 | Gm12878 | 47 | 20 | 536 | 107 | Helas3 | 7 | 3 | 365 | 64 |
| Memczak2013 | cd_34 | 9 | 2 | 137 | 6 | |
| Jeck2013 | Hs68_RNase | 31 | 22 | 10 | 17 | Hs68_control | 4 | 4 | 107 | 89 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||