| ID | hsa_circ_0001187 | |||||
| Alias | hsa_circ_000341 | |||||
| Position | chr21:37619814-37620866 | |||||
| Strand | + | |||||
| Genomic length | 1052 | |||||
| Spliced sequence length | 301 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005128 | |||||
| Gene symbol | DOPEY2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 807 | 169 | 30 | 48 | occipital_lobe | 291 | 90 | 18 | 32 | diencephalon | 171 | 94 | 41 | 41 | cerebellum | 99 | 74 | 28 | 21 | temporal_lobe | 669 | 116 | 33 | 39 | Sy5y_exp1_D2 | 4 | 4 | 13 | 0 | parietal_lobe | 222 | 100 | 52 | 35 |
| Maass2017 | adipose | 5 | 4 | 2 | 0 | platelets | 8 | 6 | 0 | 0 | neutophils | 14 | 12 | 3 | 0 | decidua | 2 | 2 | 0 | 0 |
| Salzman2013 | Helas3 | 5 | 4 | 2 | 1 | Bj | 15 | 10 | 11 | 5 | Gm12878 | 10 | 6 | 4 | 2 | H1hesc | 9 | 5 | 19 | 0 | Hmec | 9 | 2 | 0 | 0 | Hepg2 | 4 | 2 | 3 | 1 | Ag04450 | 26 | 22 | 22 | 5 | Sknshra | 8 | 7 | 14 | 1 | Nhek | 18 | 10 | 14 | 2 | Huvec | 1 | 1 | 8 | 1 | K562 | 1 | 1 | 11 | 1 |
| Memczak2013 | cd_19 | 21 | 12 | 0 | 0 | cd_34 | 24 | 6 | 2 | 0 | neutr | 4 | 3 | 1 | 0 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||