| ID | hsa_circ_0000907 | |||||
| Alias | hsa_circ_000265 | |||||
| Position | chr19:17212469-17213367 | |||||
| Strand | + | |||||
| Genomic length | 898 | |||||
| Spliced sequence length | 898 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_004145 | |||||
| Gene symbol | MYO9B | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 6 | 4 | 12 | 12 | VSMC | 3 | 3 | 14 | 6 | decidua | 2 | 2 | 13 | 8 | LCL | 5 | 5 | 13 | 6 | ada_scid | 3 | 3 | 20 | 4 |
| Salzman2013 | Ag04450 | 12 | 12 | 12 | 78 | Helas3 | 25 | 22 | 5 | 58 | Sknshra | 14 | 12 | 3 | 53 | Hepg2 | 33 | 21 | 0 | 39 | Hmec | 4 | 2 | 0 | 6 | Nhek | 26 | 16 | 1 | 62 | K562 | 8 | 8 | 0 | 57 | Huvec | 19 | 14 | 15 | 118 | Gm12878 | 95 | 60 | 2 | 136 | H1hesc | 34 | 22 | 2 | 83 | A549 | 9 | 9 | 3 | 28 | Bj | 34 | 28 | 6 | 70 | Mcf7 | 5 | 4 | 7 | 44 | Hsmm | 6 | 4 | 1 | 60 | Nhlf | 9 | 6 | 3 | 96 |
| Jeck2013 | Hs68_control | 16 | 13 | 0 | 28 | Hs68_RNase | 669 | 211 | 4 | 21 |
| Rybak2015 | Sy5y_exp1_D4 | 3 | 3 | 9 | 13 | Sy5y_exp1_D2 | 3 | 3 | 7 | 16 | temporal_lobe | 61 | 29 | 15 | 38 | cerebellum | 20 | 14 | 25 | 43 | Sy5y_exp1_D0 | 5 | 5 | 9 | 20 | occipital_lobe | 54 | 26 | 10 | 33 | diencephalon | 16 | 15 | 15 | 19 | SY5Y_exp2_D0 | 3 | 3 | 4 | 16 | frontal_cortex | 115 | 54 | 23 | 30 | parietal_lobe | 31 | 24 | 34 | 56 |
| Memczak2013 | cd_19 | 21 | 5 | 0 | 17 | cd_34 | 25 | 5 | 0 | 3 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||