circBase

ID	hsa_circ_0000417
Alias	hsa_circ_001472
Position	chr12:69644908-69656342
Strand	+
Genomic length	11434
Spliced sequence length	1599
Annotation	ANNOTATED CDS coding INTERNAL UTR3
Repeats	None
Best transcript	NM_007007
Gene symbol	CPSF6
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Salzman2013	Helas3	100	36	51	8
		Huvec	4	1	40	11
		K562	96	49	97	160
		Sknshra	69	19	63	23
		Mcf7	65	12	2	0
		Hepg2	122	34	43	10
		Gm12878	9	4	32	17
		H1hesc	34	18	38	21
		A549	136	42	58	20
		Ag04450	17	9	52	38
	Maass2017	cortex	2	2	2	5
	Maass2017	platelets	2	2	2	0
	Rybak2015	parietal_lobe	48	38	85	82
		Sy5y_exp1_D2	15	11	31	26
		SY5Y_exp2_D8	2	2	22	17
		SY5Y_exp2_D4	10	8	31	12
		cerebellum	44	38	155	65
		SY5Y_exp2_D0	4	4	37	31
		diencephalon	62	43	85	68
		temporal_lobe	30	17	37	44
		frontal_cortex	67	32	61	60
		occipital_lobe	35	23	96	60
		Sy5y_exp1_D0	23	19	32	40
		Sy5y_exp1_D4	9	9	29	20
	Memczak2013	cd_19	4	4	64	7
	Memczak2013	HEK293	3	3	15	7
Aligned reads	Memczak 2013 circRNA study (pooled samples)