| ID | hsa_circ_0000118 | |||||
| Alias | hsa_circ_002173 | |||||
| Position | chr1:117944807-117963271 | |||||
| Strand | + | |||||
| Genomic length | 18464 | |||||
| Spliced sequence length | 553 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006699 | |||||
| Gene symbol | MAN1A2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Memczak2013 | cd_19 | 66 | 21 | 3 | 68 | neutr | 10 | 4 | 0 | 3 | HEK293 | 2 | 2 | 2 | 1 | cd_34 | 21 | 3 | 1 | 10 |
| Rybak2015 | temporal_lobe | 1077 | 177 | 74 | 182 | frontal_cortex | 1816 | 275 | 103 | 273 | SY5Y_exp2_D8 | 14 | 12 | 11 | 19 | SY5Y_exp2_D4 | 32 | 17 | 16 | 16 | SY5Y_exp2_D0 | 29 | 20 | 20 | 15 | diencephalon | 708 | 232 | 98 | 250 | Sy5y_exp1_D0 | 67 | 32 | 13 | 38 | cerebellum | 420 | 185 | 85 | 212 | occipital_lobe | 1184 | 274 | 97 | 272 | Sy5y_exp1_D2 | 65 | 38 | 21 | 30 | Sy5y_exp1_D4 | 40 | 25 | 17 | 17 | parietal_lobe | 508 | 164 | 83 | 199 |
| Maass2017 | EPC | 2 | 2 | 0 | 4 | vena_cava | 12 | 11 | 3 | 4 | umbilical_cord | 5 | 4 | 2 | 2 | placenta | 9 | 9 | 24 | 17 | adipose | 2 | 2 | 15 | 3 | muscle | 2 | 2 | 4 | 0 | decidua | 3 | 3 | 9 | 5 | cortex | 28 | 23 | 5 | 8 | right_atrium | 3 | 3 | 5 | 3 | chondrocytes | 9 | 7 | 0 | 2 | HUAEC | 5 | 4 | 8 | 5 | ada_scid | 8 | 7 | 0 | 6 | LCL | 9 | 9 | 3 | 7 | neutophils | 6 | 5 | 0 | 3 | WAS2 | 34 | 21 | 5 | 9 | MSC_047 | 4 | 4 | 3 | 4 | platelets | 35 | 22 | 3 | 5 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||