| ID | hsa_circ_0000098 | |||||
| Alias | hsa_circ_001351 | |||||
| Position | chr1:101372407-101387397 | |||||
| Strand | + | |||||
| Genomic length | 14990 | |||||
| Spliced sequence length | 660 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001144884 | |||||
| Gene symbol | SLC30A7 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 84 | 50 | 6 | 7 | Hs68_control | 8 | 5 | 64 | 46 |
| Memczak2013 | cd_19 | 6 | 2 | 3 | 0 | |
| Rybak2015 | temporal_lobe | 76 | 31 | 40 | 51 | cerebellum | 57 | 48 | 48 | 70 | occipital_lobe | 156 | 82 | 66 | 107 | frontal_cortex | 194 | 75 | 67 | 113 | parietal_lobe | 49 | 29 | 60 | 65 | diencephalon | 62 | 47 | 58 | 78 |
| Salzman2013 | K562 | 27 | 16 | 27 | 16 | Gm12878 | 15 | 8 | 51 | 28 | Sknshra | 11 | 7 | 66 | 56 | H1hesc | 26 | 11 | 49 | 12 | Bj | 11 | 6 | 28 | 21 | Nhek | 18 | 5 | 43 | 28 | Huvec | 9 | 1 | 41 | 20 | Helas3 | 18 | 10 | 35 | 22 | Hepg2 | 15 | 8 | 32 | 17 | A549 | 5 | 3 | 18 | 15 | Ag04450 | 19 | 13 | 44 | 45 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||