circBase

ID	hsa_circ_0000002
Alias	hsa_circ_000531
Position	chr1:1158623-1159348
Strand	-
Genomic length	725
Spliced sequence length	251
Annotation	ANNOTATED CDS coding INTERNAL
Repeats	None
Best transcript	NM_016176
Gene symbol	SDF4
Scores	circRNA study	Sample	total reads circular junction	unique reads circular junction	unique reads linear-5' junctions	unique reads linear-3' junctions
	Rybak2015	parietal_lobe	12	10	69	65
		temporal_lobe	19	9	75	33
		frontal_cortex	33	17	59	59
		occipital_lobe	20	10	45	42
		Sy5y_exp1_D0	4	4	44	39
		Sy5y_exp1_D4	3	3	31	23
		Sy5y_exp1_D2	5	5	40	31
		diencephalon	12	8	78	63
		cerebellum	6	6	59	57
		SY5Y_exp2_D4	4	4	18	14
		SY5Y_exp2_D8	3	3	17	14
		SY5Y_exp2_D0	4	4	26	19
	Salzman2013	Ag04450	63	25	96	84
		Gm12878	118	45	63	46
		Bj	15	7	75	32
		Sknshra	14	5	74	49
		H1hesc	22	10	38	45
		Helas3	50	17	82	63
		K562	521	234	142	94
		Huvec	17	4	140	81
		Hepg2	9	5	78	30
		Hsmm	33	2	34	59
		A549	39	14	36	34
		Mcf7	44	4	31	49
	Memczak2013	cd_19	4	3	16	10
	Maass2017	adipose	3	2	17	11
		HUAEC	3	3	34	36
		WAS2	7	6	22	12
		chondrocytes	3	3	9	15
		cortex	2	2	10	4
		platelets	4	4	0	0
		decidua	2	2	17	19
Aligned reads	Memczak 2013 circRNA study (pooled samples)