ID hsa_circ_0000002
Aliashsa_circ_000531
Position chr1:1158623-1159348
Strand -
Genomic length 725
Spliced sequence length 251
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
Repeats None
Best transcript NM_016176
Gene symbol SDF4
Scores circRNA study Sample total reads
circular junction
unique reads
circular junction
unique reads
linear-5' junctions
unique reads
linear-3' junctions
Salzman2013K562 521 234 142 94
Sknshra 14 5 74 49
Helas3 50 17 82 63
A549 39 14 36 34
Gm12878 118 45 63 46
Hepg2 9 5 78 30
Bj 15 7 75 32
H1hesc 22 10 38 45
Ag04450 63 25 96 84
Mcf7 44 4 31 49
Huvec 17 4 140 81
Hsmm 33 2 34 59
Rybak2015Sy5y_exp1_D0 4 4 44 39
cerebellum 6 6 59 57
SY5Y_exp2_D4 4 4 18 14
diencephalon 12 8 78 63
temporal_lobe 19 9 75 33
frontal_cortex 33 17 59 59
Sy5y_exp1_D2 5 5 40 31
SY5Y_exp2_D8 3 3 17 14
Sy5y_exp1_D4 3 3 31 23
parietal_lobe 12 10 69 65
SY5Y_exp2_D0 4 4 26 19
occipital_lobe 20 10 45 42
Maass2017decidua 2 2 17 19
HUAEC 3 3 34 36
adipose 3 2 17 11
cortex 2 2 10 4
WAS2 7 6 22 12
chondrocytes 3 3 9 15
platelets 4 4 0 0
Memczak2013cd_19 4 3 16 10
Aligned readsMemczak 2013 circRNA study (pooled samples)
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