| ID | hsa_circ_0089254 | |||||
| Position | chr9:134518625-134526336 | |||||
| Strand | - | |||||
| Genomic length | 7711 | |||||
| Spliced sequence length | 433 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_198679 | |||||
| Gene symbol | RAPGEF1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | parietal_lobe | 11 | 11 | 38 | 66 | temporal_lobe | 20 | 13 | 8 | 48 | occipital_lobe | 2 | 2 | 19 | 38 | diencephalon | 7 | 6 | 27 | 83 | cerebellum | 4 | 4 | 36 | 60 | frontal_cortex | 27 | 15 | 20 | 68 |
| Salzman2013 | Helas3 | 8 | 1 | 3 | 77 | Hepg2 | 4 | 2 | 2 | 45 | H1hesc | 2 | 1 | 13 | 74 | Mcf7 | Gm12878 | 9 | 3 | 32 | 115 | Huvec | 10 | 1 | 4 | 71 | Bj | 1 | 1 | 2 | 37 | A549 | 10 | 4 | 3 | 39 | Ag04450 | 3 | 3 | 12 | 59 | Nhek | K562 | 19 | 12 | 22 | 112 |