| ID | hsa_circ_0084582 | |||||
| Position | chr8:61653817-61655656 | |||||
| Strand | + | |||||
| Genomic length | 1839 | |||||
| Spliced sequence length | 1839 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_017780 | |||||
| Gene symbol | CHD7 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | parietal_lobe | 17 | 14 | 49 | 16 | diencephalon | 16 | 14 | 18 | 18 | frontal_cortex | 10 | 6 | 19 | 4 | cerebellum | 72 | 54 | 144 | 69 | SY5Y_exp2_D4 | 2 | 2 | 6 | 24 | Sy5y_exp1_D4 | 2 | 2 | 10 | 22 | temporal_lobe | 6 | 5 | 17 | 5 | Sy5y_exp1_D2 | 7 | 7 | 9 | 19 | SY5Y_exp2_D8 | 2 | 2 | 3 | 27 | occipital_lobe | 12 | 10 | 24 | 10 | SY5Y_exp2_D0 | 2 | 2 | 12 | 30 | Sy5y_exp1_D0 | 10 | 7 | 4 | 24 |
| Salzman2013 | Bj | Hepg2 | 15 | 10 | 9 | 47 | Gm12878 | 68 | 33 | 6 | 35 | H1hesc | 31 | 13 | 16 | 51 | Ag04450 | 1 | 1 | 0 | 0 | A549 | 24 | 11 | 1 | 19 | Sknshra | 12 | 5 | 5 | 19 | Helas3 | 22 | 10 | 13 | 32 | Nhek | 16 | 3 | 5 | 12 | Huvec | 41 | 10 | 5 | 10 | K562 | 9 | 6 | 7 | 12 | Mcf7 |