| ID | hsa_circ_0078617 | |||||
| Position | chr6:161455290-161471011 | |||||
| Strand | + | |||||
| Genomic length | 15721 | |||||
| Spliced sequence length | 1555 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_005922 | |||||
| Gene symbol | MAP3K4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | SY5Y_exp2_D4 | 6 | 5 | 9 | 10 | occipital_lobe | 20 | 15 | 35 | 33 | parietal_lobe | 10 | 10 | 45 | 35 | frontal_cortex | 42 | 19 | 40 | 40 | cerebellum | 18 | 16 | 32 | 32 | Sy5y_exp1_D0 | 4 | 3 | 7 | 9 | Sy5y_exp1_D4 | 3 | 3 | 7 | 17 | temporal_lobe | 23 | 12 | 21 | 21 | Sy5y_exp1_D2 | 5 | 4 | 5 | 9 | diencephalon | 33 | 28 | 31 | 27 |
| Maass2017 | osteocytes | 4 | 4 | 0 | 6 | LCL | 2 | 2 | 2 | 7 |
| Salzman2013 | Helas3 | 9 | 6 | 12 | 15 | Nhek | 9 | 3 | 7 | 22 | Hepg2 | 6 | 4 | 12 | 2 | H1hesc | 26 | 16 | 17 | 34 | K562 | 71 | 54 | 56 | 101 | Sknshra | 18 | 6 | 15 | 13 | Gm12878 | 7 | 3 | 21 | 33 | Ag04450 | 20 | 10 | 10 | 17 |