| ID | hsa_circ_0070039 | |||||
| Position | chr4:77055327-77065626 | |||||
| Strand | - | |||||
| Genomic length | 10299 | |||||
| Spliced sequence length | 643 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_017426 | |||||
| Gene symbol | NUP54 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 3 | 3 | 16 | 14 | decidua | 3 | 3 | 0 | 3 | EPC | 2 | 2 | 4 | 7 | LCL | 2 | 2 | 11 | 7 | right_atrium | 2 | 2 | 0 | 2 |
| Salzman2013 | Helas3 | 21 | 14 | 37 | 14 | A549 | 32 | 15 | 16 | 20 | H1hesc | 109 | 38 | 85 | 83 | Bj | 12 | 10 | 24 | 18 | Nhek | 41 | 12 | 45 | 28 | Ag04450 | 51 | 25 | 25 | 26 | K562 | 195 | 99 | 80 | 178 | Gm12878 | 91 | 39 | 32 | 51 | Hepg2 | 27 | 10 | 43 | 13 | Huvec | 30 | 10 | 43 | 14 | Sknshra | 29 | 16 | 21 | 14 |
| Rybak2015 | occipital_lobe | 267 | 113 | 107 | 117 | temporal_lobe | 282 | 84 | 72 | 70 | frontal_cortex | 384 | 131 | 108 | 140 | Sy5y_exp1_D0 | 11 | 9 | 7 | 19 | SY5Y_exp2_D4 | 10 | 6 | 9 | 13 | cerebellum | 84 | 56 | 95 | 102 | Sy5y_exp1_D4 | 5 | 4 | 4 | 21 | parietal_lobe | 103 | 61 | 95 | 90 | Sy5y_exp1_D2 | 7 | 6 | 11 | 16 | SY5Y_exp2_D8 | 3 | 3 | 6 | 13 | SY5Y_exp2_D0 | 2 | 2 | 7 | 9 | diencephalon | 110 | 77 | 53 | 82 |