| ID | hsa_circ_0054598 | |||||
| Position | chr2:55252221-55255356 | |||||
| Strand | - | |||||
| Genomic length | 3135 | |||||
| Spliced sequence length | 2457 | |||||
| Annotation |
| |||||
| Repeats | NA | |||||
| Best transcript | NM_020532 | |||||
| Gene symbol | RTN4 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 2359 | 274 | 36 | 280 | diencephalon | 290 | 116 | 74 | 344 | temporal_lobe | 958 | 140 | 26 | 165 | parietal_lobe | 732 | 161 | 62 | 239 | SY5Y_exp2_D0 | 4 | 3 | 0 | 12 | occipital_lobe | 1295 | 209 | 44 | 270 | Sy5y_exp1_D0 | 8 | 5 | 0 | 8 | Sy5y_exp1_D4 | 6 | 5 | 2 | 18 | Sy5y_exp1_D2 | 4 | 4 | 5 | 13 | cerebellum | 326 | 132 | 55 | 201 | SY5Y_exp2_D8 | 3 | 2 | 0 | 9 |
| Salzman2013 | H1hesc | 126 | 56 | 37 | 35 | Ag04450 | 2 | 2 | 9 | 11 | Gm12878 | 2 | 2 | 11 | 1 | Helas3 | 3 | 3 | 1 | 0 | K562 | 33 | 23 | 7 | 4 |