| ID | hsa_circ_0007401 | |||||
| Position | chr11:3789810-3797251 | |||||
| Strand | - | |||||
| Genomic length | 7441 | |||||
| Spliced sequence length | 593 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016320 | |||||
| Gene symbol | NUP98 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D2 | 2 | 2 | 44 | 34 | temporal_lobe | 28 | 13 | 66 | 50 | SY5Y_exp2_D8 | 2 | 2 | 31 | 25 | frontal_cortex | 48 | 24 | 92 | 73 | cerebellum | 10 | 9 | 152 | 118 | occipital_lobe | 31 | 22 | 85 | 85 | diencephalon | 10 | 9 | 107 | 82 | parietal_lobe | 13 | 12 | 120 | 94 | Sy5y_exp1_D0 | 3 | 3 | 48 | 45 |
| Salzman2013 | Mcf7 | 1 | 1 | 24 | 5 | Sknshra | 7 | 4 | 109 | 73 | A549 | 23 | 13 | 161 | 138 | Ag04450 | 5 | 5 | 133 | 104 | Gm12878 | 3 | 2 | 141 | 121 | Hepg2 | 6 | 2 | 260 | 191 | K562 | 12 | 9 | 294 | 268 | Helas3 | 5 | 5 | 198 | 170 | Bj | 5 | 3 | 134 | 67 | H1hesc | 8 | 4 | 184 | 192 |
| Jeck2013 | Hs68_RNase | 71 | 49 | 22 | 29 | Hs68_control | 5 | 5 | 91 | 87 |