| ID | hsa_circ_0006884 | |||||
| Position | chr3:119219541-119232566 | |||||
| Strand | + | |||||
| Genomic length | 13025 | |||||
| Spliced sequence length | 402 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_016589 | |||||
| Gene symbol | TIMMDC1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | parietal_lobe | 25 | 21 | 42 | 74 | SY5Y_exp2_D8 | 2 | 2 | 22 | 17 | cerebellum | 26 | 23 | 49 | 80 | diencephalon | 36 | 30 | 51 | 103 | occipital_lobe | 50 | 26 | 44 | 95 | Sy5y_exp1_D4 | 4 | 4 | 30 | 36 | Sy5y_exp1_D2 | 4 | 4 | 42 | 50 | temporal_lobe | 21 | 15 | 16 | 76 | frontal_cortex | 86 | 43 | 52 | 136 |
| Maass2017 | VSMC | 2 | 2 | 7 | 8 | platelets | 6 | 6 | 0 | 4 | WAS2 | 2 | 2 | 7 | 16 |
| Jeck2013 | Hs68_control | 7 | 6 | 93 | 103 | Hs68_RNase | 93 | 56 | 8 | 80 |
| Salzman2013 | K562 | 7 | 6 | 65 | 91 | Nhlf | 2 | 1 | 9 | 0 | Nhek | 13 | 6 | 70 | 51 | Gm12878 | 13 | 10 | 13 | 25 | A549 | 5 | 3 | 42 | 35 | Sknshra | 20 | 11 | 72 | 80 | Helas3 | 3 | 2 | 38 | 23 | Hepg2 | 4 | 3 | 34 | 12 | H1hesc | 4 | 3 | 62 | 34 | Bj | 11 | 5 | 24 | 26 | Ag04450 | 7 | 5 | 45 | 39 |