| ID | hsa_circ_0006877 | |||||
| Position | chr19:11230767-11231198 | |||||
| Strand | + | |||||
| Genomic length | 431 | |||||
| Spliced sequence length | 295 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_000527 | |||||
| Gene symbol | LDLR | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Mcf7 | 106 | 34 | 108 | 42 | Gm12878 | 294 | 119 | 115 | 57 | Huvec | 33 | 15 | 114 | 81 | Hepg2 | 39 | 17 | 145 | 110 | Ag04450 | 15 | 10 | 70 | 14 | H1hesc | 129 | 52 | 212 | 101 | Helas3 | 60 | 28 | 144 | 136 | Sknshra | 3 | 3 | 24 | 4 | K562 | 134 | 104 | 253 | 88 | Hmec | Nhlf | 20 | 4 | 90 | 46 | Hsmm | 20 | 4 | 36 | 12 | Bj | 47 | 22 | 12 | 6 | A549 | 24 | 13 | 35 | 6 | Nhek | 379 | 131 | 383 | 216 |
| Jeck2013 | Hs68_control | 3 | 3 | 62 | 57 | Hs68_RNase | 165 | 85 | 13 | 48 |
| Rybak2015 | frontal_cortex | 19 | 10 | 7 | 13 | parietal_lobe | 12 | 12 | 19 | 15 | occipital_lobe | 20 | 15 | 8 | 7 | temporal_lobe | 7 | 6 | 9 | 0 | cerebellum | 12 | 10 | 17 | 14 | diencephalon | 20 | 15 | 36 | 18 |
| Maass2017 | WAS2 | 3 | 3 | 12 | 13 | |