| ID | hsa_circ_0006461 | |||||
| Position | chr19:5039846-5041262 | |||||
| Strand | + | |||||
| Genomic length | 1416 | |||||
| Spliced sequence length | 291 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015015 | |||||
| Gene symbol | KDM4B | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 31 | 27 | 62 | 60 | Hs68_control | 1 | 1 | 25 | 28 |
| Rybak2015 | temporal_lobe | 13 | 10 | 65 | 46 | cerebellum | 3 | 3 | 69 | 96 | Sy5y_exp1_D0 | 3 | 3 | 10 | 21 | diencephalon | 3 | 3 | 59 | 79 | frontal_cortex | 15 | 9 | 79 | 116 | occipital_lobe | 15 | 8 | 74 | 101 | parietal_lobe | 3 | 3 | 74 | 92 |
| Salzman2013 | Sknshra | 5 | 5 | 14 | 108 | Bj | 18 | 8 | 22 | 103 | Huvec | 1 | 1 | 27 | 52 | A549 | 17 | 12 | 7 | 51 | Gm12878 | 14 | 9 | 49 | 76 | Hepg2 | 14 | 5 | 13 | 128 | H1hesc | 4 | 4 | 55 | 94 | Mcf7 | 14 | 4 | 6 | 40 | K562 | 11 | 11 | 20 | 82 | Ag04450 | 7 | 5 | 22 | 91 | Helas3 | 8 | 5 | 28 | 147 |