ID hsa_circ_0006117
Position chr20:2944917-2945848
Strand +
Genomic length 931
Spliced sequence length 421
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
  • OVCODE
  • OVEXON
  • UTR5
Repeats None
Best transcript NM_002836
Gene symbol PTPRA
Scores circRNA study Sample total reads
circular junction		 unique reads
circular junction		 unique reads
linear-5' junctions		 unique reads
linear-3' junctions
Jeck2013Hs68_RNase 301 117 22 18
Hs68_control 19 17 38 74
Maass2017ada_scid 2 2 2 2
muscle 2 2 0 6
platelets 39 24 11 5
adipose 10 8 4 4
chondrocytes 2 2 0 6
WAS2 6 5 6 16
Salzman2013Ag04450 43 29 39 54
Helas3 21 12 20 57
Huvec 7 2 17 59
Sknshra 24 14 29 82
A549 65 29 31 64
Hepg2 39 21 22 46
Gm12878 57 34 36 78
H1hesc 66 36 56 122
Nhek 30 12 27 62
Bj 21 14 20 42
K562 89 60 85 151
Rybak2015Sy5y_exp1_D0 5 4 11 18
Sy5y_exp1_D4 2 2 11 32
SY5Y_exp2_D0 2 2 19 14
Sy5y_exp1_D2 5 5 16 19
occipital_lobe 236 109 81 47
frontal_cortex 306 121 105 66
temporal_lobe 85 42 80 40
diencephalon 180 113 132 125
SY5Y_exp2_D8 3 3 6 17
cerebellum 164 98 77 92
parietal_lobe 102 74 91 84