ID hsa_circ_0006117
Position chr20:2944917-2945848
Strand +
Genomic length 931
Spliced sequence length 421
Annotation
  • ANNOTATED
  • CDS
  • coding
  • INTERNAL
  • OVCODE
  • OVEXON
  • UTR5
Repeats None
Best transcript NM_002836
Gene symbol PTPRA
Scores circRNA study Sample total reads
circular junction		 unique reads
circular junction		 unique reads
linear-5' junctions		 unique reads
linear-3' junctions
Salzman2013Sknshra 24 14 29 82
Bj 21 14 20 42
Gm12878 57 34 36 78
Helas3 21 12 20 57
Ag04450 43 29 39 54
Nhek 30 12 27 62
K562 89 60 85 151
Hepg2 39 21 22 46
H1hesc 66 36 56 122
Huvec 7 2 17 59
A549 65 29 31 64
Maass2017WAS2 6 5 6 16
ada_scid 2 2 2 2
platelets 39 24 11 5
muscle 2 2 0 6
adipose 10 8 4 4
chondrocytes 2 2 0 6
Jeck2013Hs68_RNase 301 117 22 18
Hs68_control 19 17 38 74
Rybak2015Sy5y_exp1_D0 5 4 11 18
frontal_cortex 306 121 105 66
Sy5y_exp1_D2 5 5 16 19
Sy5y_exp1_D4 2 2 11 32
SY5Y_exp2_D0 2 2 19 14
cerebellum 164 98 77 92
occipital_lobe 236 109 81 47
temporal_lobe 85 42 80 40
SY5Y_exp2_D8 3 3 6 17
diencephalon 180 113 132 125
parietal_lobe 102 74 91 84