| ID | hsa_circ_0006006 | |||||
| Position | chr2:173435453-173460751 | |||||
| Strand | + | |||||
| Genomic length | 25298 | |||||
| Spliced sequence length | 519 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002610 | |||||
| Gene symbol | PDK1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Ag04450 | 3 | 2 | 61 | 0 | Nhek | 15 | 3 | 79 | 1 | Mcf7 | 17 | 3 | 5 | 0 | Sknshra | 5 | 3 | 46 | 1 | A549 | 8 | 3 | 18 | 0 | Hepg2 | 1 | 1 | 49 | 4 | Helas3 | Bj | 17 | 11 | 37 | 1 | Hmec | K562 | 27 | 18 | 538 | 31 | Gm12878 | 4 | 3 | 208 | 11 |
| Jeck2013 | Hs68_control | 1 | 1 | 29 | 7 | Hs68_RNase | 18 | 13 | 37 | 0 |
| Rybak2015 | Sy5y_exp1_D0 | 2 | 2 | 10 | 0 | temporal_lobe | 3 | 3 | 42 | 3 | occipital_lobe | 3 | 2 | 48 | 0 | diencephalon | 10 | 8 | 83 | 4 | frontal_cortex | 15 | 7 | 64 | 7 |
| Maass2017 | platelets | 4 | 4 | 18 | 5 | |