| ID | hsa_circ_0005974 | |||||
| Position | chr11:34093272-34098189 | |||||
| Strand | + | |||||
| Genomic length | 4917 | |||||
| Spliced sequence length | 472 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_005898 | |||||
| Gene symbol | CAPRIN1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Bj | 3 | 1 | 25 | 40 | Gm12878 | Helas3 | 1 | 1 | 11 | 43 | Nhek | 3 | 1 | 7 | 79 | Ag04450 | 6 | 3 | 65 | 118 | Sknshra | 11 | 2 | 27 | 69 | A549 | 12 | 6 | 22 | 67 | Hepg2 | K562 | 6 | 5 | 100 | 309 |
| Maass2017 | WAS2 | 3 | 3 | 24 | 36 | LCL | 4 | 4 | 15 | 25 | platelets | 3 | 3 | 0 | 3 |
| Jeck2013 | Hs68_RNase | 66 | 30 | 5 | 22 | Hs68_control | 5 | 4 | 71 | 84 |
| Rybak2015 | Sy5y_exp1_D0 | 7 | 5 | 61 | 98 | diencephalon | 22 | 21 | 210 | 258 | temporal_lobe | 70 | 40 | 162 | 136 | cerebellum | 19 | 13 | 165 | 199 | SY5Y_exp2_D4 | 2 | 2 | 33 | 53 | occipital_lobe | 89 | 52 | 174 | 188 | parietal_lobe | 26 | 19 | 146 | 172 | frontal_cortex | 106 | 50 | 199 | 210 | Sy5y_exp1_D2 | 4 | 3 | 71 | 91 | Sy5y_exp1_D4 | 3 | 3 | 44 | 70 |