| ID | hsa_circ_0005654 | |||||
| Position | chr4:121675707-121732604 | |||||
| Strand | - | |||||
| Genomic length | 56897 | |||||
| Spliced sequence length | 758 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018699 | |||||
| Gene symbol | PRDM5 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | diencephalon | 95 | 67 | 21 | 18 | cerebellum | 95 | 68 | 19 | 29 | Sy5y_exp1_D4 | 8 | 7 | 2 | 2 | SY5Y_exp2_D0 | 6 | 6 | 2 | 7 | parietal_lobe | 34 | 23 | 18 | 21 | occipital_lobe | 76 | 38 | 13 | 16 | Sy5y_exp1_D2 | 14 | 12 | 3 | 4 | temporal_lobe | 58 | 33 | 10 | 8 | Sy5y_exp1_D0 | 8 | 6 | 2 | 3 | SY5Y_exp2_D8 | 2 | 2 | 2 | 5 | frontal_cortex | 100 | 48 | 16 | 19 |
| Jeck2013 | Hs68_control | 12 | 9 | 15 | 16 | Hs68_RNase | 44 | 29 | 22 | 7 |
| Salzman2013 | Huvec | 4 | 2 | 1 | 6 | Sknshra | 10 | 5 | 0 | 9 | Bj | A549 | 4 | 2 | 0 | 5 | Ag04450 | 4 | 3 | 6 | 13 | H1hesc | 15 | 8 | 13 | 38 |
| Maass2017 | vena_cava | 6 | 6 | 0 | 3 | platelets | 4 | 4 | 0 | 0 | chondrocytes | 2 | 2 | 0 | 0 | MSC_047 | 3 | 3 | 0 | 3 |