| ID | hsa_circ_0005260 | |||||
| Position | chr5:14316621-14336836 | |||||
| Strand | + | |||||
| Genomic length | 20215 | |||||
| Spliced sequence length | 546 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_007118 | |||||
| Gene symbol | TRIO | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 3 | 3 | 19 | 16 | chondrocytes | 2 | 2 | 7 | 2 | HUVEC | 2 | 2 | 0 | 0 |
| Jeck2013 | Hs68_RNase | 1001 | 241 | 215 | 28 | Hs68_control | 30 | 26 | 42 | 27 |
| Rybak2015 | Sy5y_exp1_D0 | 4 | 4 | 29 | 28 | SY5Y_exp2_D0 | 3 | 3 | 30 | 19 | frontal_cortex | 393 | 118 | 276 | 321 | occipital_lobe | 175 | 84 | 289 | 286 | diencephalon | 72 | 55 | 255 | 268 | cerebellum | 45 | 37 | 278 | 243 | parietal_lobe | 95 | 65 | 311 | 273 | temporal_lobe | 180 | 55 | 186 | 247 |
| Salzman2013 | Huvec | 27 | 8 | 125 | 123 | Sknshra | 34 | 20 | 92 | 83 | Hsmm | 52 | 10 | 115 | 86 | Gm12878 | 32 | 17 | 168 | 119 | A549 | 48 | 23 | 116 | 86 | Bj | 85 | 32 | 164 | 152 | H1hesc | 27 | 10 | 142 | 137 | Ag04450 | 189 | 87 | 245 | 234 | Mcf7 | 18 | 2 | 56 | 43 | Hepg2 | 35 | 15 | 170 | 88 | Helas3 | 48 | 22 | 191 | 100 | Nhek | 54 | 15 | 152 | 165 |