| ID | hsa_circ_0004628 | |||||
| Position | chr1:41578954-41582682 | |||||
| Strand | - | |||||
| Genomic length | 3728 | |||||
| Spliced sequence length | 333 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001172218 | |||||
| Gene symbol | SCMH1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 72 | 43 | 89 | 44 | Hs68_control | 4 | 4 | 47 | 50 |
| Salzman2013 | Ag04450 | 11 | 7 | 23 | 60 | Sknshra | 9 | 5 | 13 | 43 | A549 | 17 | 10 | 29 | 46 | Hepg2 | 7 | 3 | 16 | 47 | Nhek | 18 | 6 | 8 | 17 | Bj | 9 | 5 | 13 | 40 | H1hesc | 3 | 2 | 12 | 22 | Gm12878 | 9 | 7 | 22 | 23 | K562 | 7 | 7 | 17 | 29 | Helas3 | 6 | 5 | 18 | 55 |
| Rybak2015 | frontal_cortex | 70 | 36 | 67 | 37 | temporal_lobe | 2 | 2 | 17 | 29 | parietal_lobe | 33 | 24 | 59 | 47 | occipital_lobe | 21 | 15 | 51 | 29 | Sy5y_exp1_D0 | 2 | 2 | 12 | 22 | diencephalon | 25 | 19 | 77 | 54 | cerebellum | 11 | 11 | 63 | 35 |