| ID | hsa_circ_0004552 | |||||
| Position | chr19:11015626-11019883 | |||||
| Strand | + | |||||
| Genomic length | 4257 | |||||
| Spliced sequence length | 338 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_199141 | |||||
| Gene symbol | CARM1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 112 | 60 | 36 | 70 | parietal_lobe | 46 | 35 | 47 | 73 | temporal_lobe | 64 | 31 | 29 | 47 | occipital_lobe | 55 | 31 | 25 | 53 | diencephalon | 17 | 17 | 50 | 58 | cerebellum | 18 | 15 | 20 | 52 |
| Jeck2013 | Hs68_control | 2 | 2 | 39 | 107 | Hs68_RNase | 49 | 41 | 30 | 90 |
| Salzman2013 | Bj | 32 | 9 | 30 | 59 | H1hesc | 30 | 9 | 55 | 163 | A549 | 23 | 9 | 22 | 61 | Helas3 | 18 | 9 | 54 | 150 | Gm12878 | 17 | 5 | 25 | 86 | Sknshra | 13 | 4 | 21 | 103 | K562 | 6 | 6 | 11 | 92 | Mcf7 | 28 | 6 | 6 | 397 | Huvec | 24 | 3 | 22 | 90 | Ag04450 | 28 | 12 | 41 | 107 | Hepg2 | 27 | 7 | 46 | 143 |