| ID | hsa_circ_0004001 | |||||
| Position | chr2:201721404-201721708 | |||||
| Strand | - | |||||
| Genomic length | 304 | |||||
| Spliced sequence length | 225 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NR_027856 | |||||
| Gene symbol | CLK1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | cerebellum | 179 | 112 | 173 | 151 | diencephalon | 162 | 101 | 107 | 89 | occipital_lobe | 486 | 161 | 172 | 138 | frontal_cortex | 706 | 181 | 168 | 144 | Sy5y_exp1_D2 | 7 | 7 | 15 | 15 | Sy5y_exp1_D0 | 3 | 3 | 13 | 14 | SY5Y_exp2_D8 | 2 | 2 | 15 | 13 | parietal_lobe | 239 | 114 | 138 | 136 | temporal_lobe | 119 | 51 | 117 | 98 | SY5Y_exp2_D4 | 3 | 3 | 10 | 9 | Sy5y_exp1_D4 | 5 | 5 | 22 | 12 |
| Jeck2013 | Hs68_RNase | 78 | 46 | 4 | 5 | Hs68_control | 7 | 7 | 73 | 69 |
| Maass2017 | EPC | 2 | 2 | 2 | 5 | vena_cava | 6 | 6 | 17 | 18 | platelets | 39 | 24 | 7 | 4 | placenta | 2 | 2 | 3 | 7 | muscle | 2 | 2 | 9 | 8 |
| Salzman2013 | Helas3 | K562 | 12 | 10 | 27 | 52 | Nhek | 9 | 3 | 15 | 26 | H1hesc | 3 | 2 | 8 | 7 | Sknshra | 15 | 8 | 10 | 13 | Gm12878 | 15 | 11 | 41 | 41 |