| ID | hsa_circ_0003544 | |||||
| Position | chr5:130857082-130883883 | |||||
| Strand | - | |||||
| Genomic length | 26801 | |||||
| Spliced sequence length | 276 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001164386 | |||||
| Gene symbol | RAPGEF6 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 2 | 2 | 0 | 0 | |
| Jeck2013 | Hs68_control | Hs68_RNase | 7 | 7 | 19 | 9 |
| Salzman2013 | A549 | 2 | 2 | 11 | 47 | K562 | 27 | 22 | 107 | 158 | Gm12878 | 16 | 11 | 35 | 36 | Sknshra | Helas3 | 6 | 2 | 7 | 41 | H1hesc | 22 | 10 | 25 | 15 | Ag04450 | 1 | 1 | 12 | 66 | Huvec | 1 | 1 | 1 | 15 |
| Rybak2015 | occipital_lobe | 40 | 21 | 51 | 81 | temporal_lobe | 52 | 22 | 27 | 47 | parietal_lobe | 26 | 23 | 60 | 72 | cerebellum | 21 | 17 | 72 | 132 | diencephalon | 8 | 8 | 40 | 107 | frontal_cortex | 55 | 30 | 49 | 92 |