| ID | hsa_circ_0003489 | |||||
| Position | chr13:26974589-26975761 | |||||
| Strand | + | |||||
| Genomic length | 1172 | |||||
| Spliced sequence length | 336 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001260 | |||||
| Gene symbol | CDK8 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | frontal_cortex | 150 | 63 | 66 | 66 | parietal_lobe | 56 | 36 | 58 | 51 | Sy5y_exp1_D0 | 5 | 5 | 16 | 22 | occipital_lobe | 80 | 52 | 55 | 70 | cerebellum | 60 | 47 | 59 | 72 | SY5Y_exp2_D8 | 3 | 3 | 11 | 10 | diencephalon | 57 | 40 | 106 | 109 | temporal_lobe | 58 | 29 | 39 | 44 | Sy5y_exp1_D2 | 4 | 4 | 18 | 13 |
| Jeck2013 | Hs68_RNase | 68 | 39 | 0 | 0 | Hs68_control | 1 | 1 | 21 | 37 |
| Maass2017 | platelets | 4 | 4 | 0 | 0 | |
| Salzman2013 | K562 | 7 | 5 | 52 | 74 | A549 | 4 | 3 | 3 | 42 | H1hesc | 5 | 3 | 12 | 92 | Helas3 | 4 | 2 | 3 | 62 | Ag04450 | 5 | 4 | 12 | 52 | Huvec | 9 | 2 | 0 | 20 | Nhek | 5 | 1 | 20 | 70 | Sknshra | 4 | 1 | 5 | 38 | Gm12878 | 8 | 2 | 9 | 60 | Hepg2 | Mcf7 | 20 | 4 | 0 | 19 |