| ID | hsa_circ_0003458 | |||||
| Position | chr9:115013208-115060196 | |||||
| Strand | - | |||||
| Genomic length | 46988 | |||||
| Spliced sequence length | 853 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001163790 | |||||
| Gene symbol | PTBP3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Hepg2 | 30 | 15 | 173 | 189 | K562 | 17 | 17 | 184 | 338 | Mcf7 | 27 | 7 | 69 | 216 | Nhlf | 10 | 1 | 18 | 19 | Gm12878 | 6 | 3 | 89 | 208 | Bj | 11 | 10 | 67 | 103 | A549 | 44 | 26 | 113 | 207 | Sknshra | 9 | 4 | 61 | 82 | Hsmm | 6 | 2 | 35 | 41 | H1hesc | 12 | 8 | 105 | 366 | Ag04450 | 10 | 9 | 62 | 79 | Helas3 | 17 | 13 | 139 | 155 |
| Jeck2013 | Hs68_control | 9 | 6 | 72 | 66 | Hs68_RNase | 55 | 34 | 2 | 14 |
| Rybak2015 | frontal_cortex | 38 | 19 | 42 | 41 | parietal_lobe | 11 | 10 | 48 | 77 | Sy5y_exp1_D0 | 3 | 2 | 17 | 14 | temporal_lobe | 9 | 4 | 26 | 45 | diencephalon | 31 | 27 | 70 | 101 | cerebellum | 45 | 39 | 114 | 91 | occipital_lobe | 24 | 14 | 55 | 47 |