| ID | hsa_circ_0003270 | |||||
| Position | chr9:128099296-128099870 | |||||
| Strand | + | |||||
| Genomic length | 574 | |||||
| Spliced sequence length | 449 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_015635 | |||||
| Gene symbol | GAPVD1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | WAS2 | 4 | 4 | 0 | 10 | vena_cava | 2 | 2 | 0 | 7 | platelets | 3 | 3 | 0 | 6 | LCL | 3 | 2 | 4 | 5 |
| Salzman2013 | Hepg2 | 106 | 43 | 41 | 20 | K562 | 78 | 64 | 81 | 88 | H1hesc | 66 | 34 | 23 | 18 | Bj | 42 | 21 | 5 | 18 | Huvec | 27 | 11 | 14 | 12 | Mcf7 | 74 | 16 | 14 | 4 | Sknshra | 52 | 24 | 9 | 10 | Helas3 | 73 | 36 | 39 | 17 | Nhlf | 21 | 2 | 12 | 0 | Ag04450 | 75 | 37 | 17 | 16 | A549 | 42 | 24 | 11 | 9 | Gm12878 | 93 | 51 | 26 | 12 | Nhek | 66 | 25 | 23 | 25 |
| Rybak2015 | temporal_lobe | 72 | 37 | 12 | 48 | Sy5y_exp1_D4 | 2 | 2 | 7 | 23 | cerebellum | 88 | 62 | 40 | 62 | occipital_lobe | 169 | 63 | 16 | 54 | frontal_cortex | 233 | 85 | 26 | 60 | diencephalon | 124 | 85 | 46 | 93 | Sy5y_exp1_D0 | 6 | 5 | 10 | 18 | parietal_lobe | 97 | 50 | 40 | 61 |
| Jeck2013 | Hs68_control | 19 | 17 | 57 | 71 | Hs68_RNase | 440 | 146 | 14 | 25 |