| ID | hsa_circ_0003171 | |||||
| Position | chr8:141749116-141762415 | |||||
| Strand | - | |||||
| Genomic length | 13299 | |||||
| Spliced sequence length | 493 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001199649 | |||||
| Gene symbol | PTK2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 63 | 46 | 5 | 40 | Hs68_control | 9 | 8 | 45 | 52 |
| Salzman2013 | Sknshra | 6 | 4 | 13 | 54 | H1hesc | 10 | 6 | 16 | 93 | Bj | 1 | 1 | 8 | 27 | A549 | 3 | 3 | 12 | 57 | K562 | 7 | 7 | 78 | 140 | Gm12878 | 5 | 3 | 2 | 15 |
| Rybak2015 | occipital_lobe | 1339 | 265 | 75 | 129 | parietal_lobe | 466 | 161 | 64 | 111 | SY5Y_exp2_D4 | 4 | 4 | 21 | 26 | frontal_cortex | 1892 | 299 | 87 | 172 | cerebellum | 629 | 228 | 102 | 145 | Sy5y_exp1_D0 | 8 | 8 | 35 | 27 | diencephalon | 311 | 157 | 78 | 122 | Sy5y_exp1_D4 | 4 | 2 | 20 | 25 | temporal_lobe | 1001 | 195 | 48 | 78 | Sy5y_exp1_D2 | 7 | 6 | 27 | 28 |
| Maass2017 | LCL | 2 | 2 | 4 | 2 | right_atrium | 6 | 6 | 7 | 5 | cortex | 5 | 4 | 14 | 6 | platelets | 3 | 3 | 19 | 5 | vena_cava | 9 | 8 | 8 | 4 | EPC | 2 | 2 | 12 | 8 | muscle | 2 | 2 | 4 | 2 |