| ID | hsa_circ_0002457 | |||||
| Position | chr12:111990083-111993723 | |||||
| Strand | - | |||||
| Genomic length | 3640 | |||||
| Spliced sequence length | 320 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_002973 | |||||
| Gene symbol | ATXN2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Salzman2013 | Ag04450 | 11 | 10 | 1 | 29 | Sknshra | 13 | 8 | 3 | 14 | Gm12878 | 4 | 2 | 0 | 3 | Bj | 1 | 1 | 5 | 6 | K562 | 39 | 28 | 4 | 70 | H1hesc | 3 | 3 | 0 | 6 | Nhek | A549 | 7 | 4 | 9 | 16 |
| Jeck2013 | Hs68_RNase | 145 | 47 | 0 | 25 | Hs68_control | 23 | 14 | 1 | 44 |
| Rybak2015 | Sy5y_exp1_D0 | 4 | 4 | 2 | 19 | parietal_lobe | 25 | 18 | 5 | 76 | occipital_lobe | 117 | 56 | 9 | 79 | SY5Y_exp2_D0 | 3 | 3 | 0 | 18 | Sy5y_exp1_D2 | 11 | 8 | 0 | 19 | frontal_cortex | 139 | 61 | 0 | 81 | Sy5y_exp1_D4 | 5 | 3 | 0 | 18 | temporal_lobe | 54 | 15 | 2 | 53 | SY5Y_exp2_D4 | 3 | 2 | 2 | 14 | cerebellum | 20 | 18 | 6 | 62 | diencephalon | 26 | 23 | 16 | 93 |
| Maass2017 | cortex | 2 | 2 | 0 | 12 | LCL | 3 | 3 | 0 | 4 | platelets | 8 | 5 | 0 | 7 | vena_cava | 6 | 4 | 0 | 5 |