| ID | hsa_circ_0002138 | |||||
| Position | chr15:63824845-63855207 | |||||
| Strand | + | |||||
| Genomic length | 30362 | |||||
| Spliced sequence length | 670 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_006537 | |||||
| Gene symbol | USP3 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | SY5Y_exp2_D0 | 2 | 2 | 9 | 13 | SY5Y_exp2_D4 | 3 | 3 | 3 | 6 | occipital_lobe | 89 | 49 | 43 | 113 | cerebellum | 34 | 28 | 51 | 134 | temporal_lobe | 23 | 14 | 6 | 60 | frontal_cortex | 93 | 53 | 29 | 134 | diencephalon | 18 | 14 | 10 | 84 | parietal_lobe | 30 | 22 | 26 | 94 | Sy5y_exp1_D0 | 2 | 2 | 15 | 24 |
| Salzman2013 | Nhek | Huvec | A549 | 25 | 16 | 69 | 123 | Gm12878 | 14 | 5 | 48 | 58 | K562 | 23 | 19 | 21 | 72 | Helas3 | 20 | 12 | 23 | 52 | Ag04450 | 12 | 6 | 24 | 68 | Sknshra | 8 | 6 | 15 | 40 | Mcf7 | Bj | 4 | 3 | 16 | 37 | Hepg2 | 7 | 5 | 15 | 48 |
| Jeck2013 | Hs68_control | 10 | 9 | 17 | 38 | Hs68_RNase | 34 | 17 | 12 | 19 |