| ID | hsa_circ_0001855 | |||||
| Alias | hsa_circ_000488 | |||||
| Position | chr9:36375930-36376124 | |||||
| Strand | - | |||||
| Genomic length | 194 | |||||
| Spliced sequence length | 194 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_194329 | |||||
| Gene symbol | RNF38 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Maass2017 | platelets | 2 | 2 | 4 | 2 | |
| Memczak2013 | cd_19 | 9 | 2 | 12 | 6 | |
| Salzman2013 | K562 | 18 | 15 | 27 | 46 | Nhek | 30 | 6 | 22 | 33 | Bj | 22 | 8 | 51 | 17 | Gm12878 | 37 | 16 | 65 | 78 | Ag04450 | 38 | 15 | 71 | 41 | A549 | 36 | 10 | 35 | 32 | H1hesc | 46 | 16 | 115 | 148 | Hepg2 | 9 | 3 | 61 | 28 | Mcf7 | 10 | 1 | 12 | 16 | Helas3 | 8 | 5 | 66 | 45 | Huvec | 20 | 3 | 45 | 52 | Sknshra | 15 | 6 | 71 | 43 |
| Rybak2015 | parietal_lobe | 36 | 30 | 128 | 72 | cerebellum | 39 | 34 | 82 | 73 | temporal_lobe | 16 | 6 | 54 | 38 | occipital_lobe | 60 | 44 | 114 | 55 | frontal_cortex | 138 | 77 | 116 | 55 | Sy5y_exp1_D2 | 3 | 3 | 10 | 13 | diencephalon | 60 | 43 | 76 | 62 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
