| ID | hsa_circ_0001851 | |||||
| Alias | hsa_circ_001991 | |||||
| Position | chr9:33971648-33973235 | |||||
| Strand | - | |||||
| Genomic length | 1587 | |||||
| Spliced sequence length | 159 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_018449 | |||||
| Gene symbol | UBAP2 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Rybak2015 | Sy5y_exp1_D4 | 8 | 8 | 11 | 16 | temporal_lobe | 77 | 34 | 41 | 69 | cerebellum | 133 | 82 | 19 | 49 | occipital_lobe | 444 | 158 | 44 | 95 | parietal_lobe | 205 | 94 | 37 | 74 | Sy5y_exp1_D0 | 16 | 14 | 12 | 11 | Sy5y_exp1_D2 | 12 | 11 | 8 | 9 | frontal_cortex | 695 | 169 | 62 | 123 | diencephalon | 208 | 102 | 48 | 85 | SY5Y_exp2_D0 | 5 | 4 | 11 | 16 | SY5Y_exp2_D8 | 4 | 4 | 5 | 4 |
| Maass2017 | VSMC | 2 | 2 | 0 | 2 | chondrocytes | 6 | 4 | 4 | 2 | adipose | 4 | 4 | 0 | 5 | EPC | 2 | 2 | 2 | 3 | decidua | 4 | 4 | 2 | 0 | vena_cava | 9 | 8 | 0 | 0 | osteocytes | 7 | 7 | 4 | 0 | platelets | 28 | 13 | 6 | 6 | umbilical_cord | 3 | 2 | 3 | 0 | neutophils | 3 | 3 | 2 | 0 | fibroblasts | 2 | 2 | 2 | 0 | ada_scid | 4 | 4 | 6 | 6 | LCL | 4 | 4 | 3 | 3 | WAS2 | 14 | 8 | 8 | 7 | right_atrium | 3 | 3 | 2 | 0 |
| Memczak2013 | cd_19 | 22 | 9 | 4 | 1 | |
| Jeck2013 | Hs68_RNase | 340 | 112 | 4 | 95 | Hs68_control | 21 | 15 | 16 | 23 |
| Salzman2013 | Gm12878 | 32 | 24 | 11 | 18 | Ag04450 | 169 | 73 | 26 | 16 | K562 | 99 | 68 | 40 | 88 | Sknshra | 76 | 28 | 6 | 7 | Nhek | 32 | 13 | 18 | 18 | A549 | 95 | 34 | 11 | 11 | Hepg2 | 24 | 15 | 3 | 5 | Helas3 | 43 | 23 | 7 | 3 | Huvec | 25 | 10 | 8 | 2 | Bj | 47 | 19 | 4 | 8 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||