| ID | hsa_circ_0001821 | |||||
| Alias | hsa_circ_000006 | |||||
| Position | chr8:128902834-128903244 | |||||
| Strand | + | |||||
| Genomic length | 410 | |||||
| Spliced sequence length | 410 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | TCONS_00015354 | |||||
| Gene symbol | TCONS_00015354 | |||||
| Experimental exidence | ||||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | 14 | 13 | 19 | 22 | Hs68_RNase | 960 | 225 | 59 | 23 |
| Maass2017 | HUAEC | 2 | 2 | 2 | 4 | WAS2 | 17 | 13 | 30 | 25 | LCL | 4 | 4 | 19 | 9 | ada_scid | 2 | 2 | 9 | 11 |
| Memczak2013 | HEK293 | 3 | 3 | 7 | 5 | |
| Salzman2013 | Hmec | Gm12878 | 286 | 110 | 87 | 108 | A549 | 136 | 58 | 47 | 130 | Nhlf | 65 | 6 | 0 | 15 | Sknshra | 45 | 22 | 40 | 114 | Hepg2 | 195 | 77 | 23 | 92 | Mcf7 | 481 | 106 | 106 | 271 | Helas3 | 104 | 50 | 32 | 136 | Ag04450 | 121 | 57 | 26 | 35 | Bj | 93 | 41 | 19 | 20 | K562 | 110 | 67 | 27 | 30 | Nhek | 118 | 35 | 25 | 32 | Huvec | 79 | 28 | 56 | 53 | Hsmm | 39 | 6 | 5 | 8 | H1hesc | 411 | 131 | 90 | 96 |
| Rybak2015 | temporal_lobe | 29 | 18 | 2 | 0 | diencephalon | 46 | 30 | 5 | 2 | occipital_lobe | 37 | 26 | 2 | 5 | frontal_cortex | 82 | 44 | 2 | 0 | cerebellum | 26 | 26 | 10 | 8 | Sy5y_exp1_D2 | 2 | 2 | 4 | 10 | parietal_lobe | 22 | 16 | 9 | 2 | Sy5y_exp1_D0 | 7 | 7 | 10 | 17 | Sy5y_exp1_D4 | 2 | 2 | 13 | 14 | SY5Y_exp2_D0 | 2 | 2 | 32 | 27 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples)![]() | |||||
