| ID | hsa_circ_0001806 | |||||
| Alias | hsa_circ_001780 | |||||
| Position | chr8:68018139-68028357 | |||||
| Strand | + | |||||
| Genomic length | 10218 | |||||
| Spliced sequence length | 432 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_024790 | |||||
| Gene symbol | CSPP1 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 30 | 23 | 16 | 9 | Hs68_control | 2 | 2 | 15 | 14 |
| Rybak2015 | frontal_cortex | 71 | 37 | 67 | 56 | occipital_lobe | 49 | 31 | 60 | 28 | Sy5y_exp1_D4 | 2 | 2 | 0 | 0 | SY5Y_exp2_D0 | 2 | 2 | 5 | 2 | diencephalon | 38 | 27 | 36 | 51 | temporal_lobe | 56 | 25 | 36 | 16 | cerebellum | 13 | 12 | 38 | 59 | parietal_lobe | 44 | 30 | 58 | 41 |
| Salzman2013 | Ag04450 | 7 | 5 | 8 | 74 | K562 | 22 | 18 | 101 | 184 | Gm12878 | 6 | 4 | 4 | 76 | A549 | 5 | 2 | 0 | 53 | Huvec | 1 | 1 | 0 | 46 | Mcf7 | 4 | 1 | 0 | 24 | Hepg2 | 7 | 1 | 2 | 54 | Sknshra | 4 | 3 | 5 | 39 | H1hesc | 2 | 2 | 5 | 84 | Bj | 5 | 2 | 3 | 23 |
| Memczak2013 | cd_19 | 11 | 4 | 2 | 0 | HEK293 | 1 | 1 | 2 | 1 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||