| ID | hsa_circ_0001798 | |||||
| Alias | hsa_circ_001779 | |||||
| Position | chr8:48308935-48320523 | |||||
| Strand | + | |||||
| Genomic length | 11588 | |||||
| Spliced sequence length | 352 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_001080394 | |||||
| Gene symbol | KIAA0146 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_control | Hs68_RNase | 17 | 16 | 1 | 65 |
| Memczak2013 | neutr | 2 | 2 | 0 | 0 | HEK293 | 1 | 1 | 0 | 1 | cd_19 | 9 | 3 | 0 | 1 |
| Rybak2015 | cerebellum | 73 | 54 | 17 | 76 | Sy5y_exp1_D4 | 3 | 3 | 0 | 8 | frontal_cortex | 133 | 65 | 11 | 34 | parietal_lobe | 31 | 26 | 15 | 33 | Sy5y_exp1_D0 | 2 | 2 | 0 | 24 | occipital_lobe | 129 | 65 | 6 | 33 | temporal_lobe | 73 | 37 | 5 | 27 | diencephalon | 105 | 75 | 19 | 68 |
| Salzman2013 | Helas3 | 1 | 1 | 2 | 12 | K562 | 19 | 13 | 9 | 37 | Nhek |
| Maass2017 | cortex | 2 | 2 | 0 | 5 | neutophils | 4 | 4 | 0 | 0 | platelets | 6 | 6 | 0 | 0 | adipose | 8 | 5 | 0 | 2 | vena_cava | 4 | 4 | 0 | 2 | WAS2 | 4 | 3 | 0 | 2 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||