| ID | hsa_circ_0001772 | |||||
| Alias | hsa_circ_002131 | |||||
| Position | chr7:155465560-155473602 | |||||
| Strand | + | |||||
| Genomic length | 8042 | |||||
| Spliced sequence length | 445 | |||||
| Annotation |
| |||||
| Repeats | None | |||||
| Best transcript | NM_053043 | |||||
| Gene symbol | RBM33 | |||||
| Scores | circRNA study | Sample | total reads circular junction |
unique reads circular junction |
unique reads linear-5' junctions |
unique reads linear-3' junctions |
|---|---|---|---|---|---|---|
| Jeck2013 | Hs68_RNase | 393 | 85 | 5 | 5 | Hs68_control | 43 | 22 | 8 | 20 |
| Rybak2015 | occipital_lobe | 220 | 74 | 88 | 40 | SY5Y_exp2_D0 | 7 | 5 | 4 | 14 | cerebellum | 83 | 54 | 59 | 45 | SY5Y_exp2_D4 | 3 | 2 | 12 | 19 | temporal_lobe | 102 | 29 | 42 | 22 | Sy5y_exp1_D4 | 14 | 11 | 5 | 13 | frontal_cortex | 315 | 80 | 88 | 56 | parietal_lobe | 75 | 44 | 62 | 41 | diencephalon | 71 | 46 | 54 | 36 | Sy5y_exp1_D2 | 9 | 7 | 8 | 10 | Sy5y_exp1_D0 | 24 | 13 | 5 | 22 |
| Memczak2013 | cd_19 | 18 | 10 | 25 | 8 | neutr | 4 | 3 | 5 | 5 | cd_34 | 16 | 1 | 0 | 0 |
| Maass2017 | adipose | 3 | 3 | 0 | 2 | vena_cava | 7 | 3 | 4 | 5 | platelets | 31 | 17 | 2 | 0 | LCL | 4 | 4 | 3 | 10 | muscle | 2 | 2 | 0 | 0 | WAS2 | 4 | 3 | 5 | 14 | right_atrium | 3 | 2 | 4 | 3 |
| Salzman2013 | Sknshra | 18 | 10 | 19 | 4 | Nhek | Ag04450 | 23 | 16 | 16 | 4 | Bj | 9 | 7 | 2 | 4 | Helas3 | 4 | 4 | 1 | 1 | K562 | 170 | 103 | 56 | 33 | Gm12878 | 18 | 11 | 5 | 2 | A549 | 13 | 11 | 8 | 3 | Huvec | 3 | 1 | 7 | 1 | Hepg2 | 4 | 3 | 3 | 1 |
| Aligned reads | Memczak 2013 circRNA study (pooled samples) | |||||